BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E05LP1|AL425131
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1440 1614 0.0
>3x_Contig1440
Length = 8228
Score = 1614 bits (813), Expect = 0.0
Identities = 825/829 (99%), Gaps = 1/829 (0%)
Strand = Plus / Minus
Query: 1 aacatgatcggatgatggcagtaacggatctcstagttgtttgttgcgttactattttgg 60
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 5266 aacatgatcggatgatggcagttacggatctcctagttgtttgttgcgttactattttgg 5207
Query: 61 ttacaacttaatgttgaggttgtttccaacgcgtacattcaacttattacgaactcagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5206 ttacaacttaatgttgaggttgtttccaacgcgtacattcaacttattacgaactcagtt 5147
Query: 121 gctgcccacgtcatcgttgagcattactattcgaaaaatgtctactgagccaaagcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5146 gctgcccacgtcatcgttgagcattactattcgaaaaatgtctactgagccaaagcaaga 5087
Query: 181 cttaccacaagtcgatgagaagactggcgagatcatcatcaatccattaaaggaggatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5086 cttaccacaagtcgatgagaagactggcgagatcatcatcaatccattaaaggaggatgg 5027
Query: 241 tactcaaaagagtccgaag-agattgagaaggagaagaagaaggctgagaaactattgaa 299
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5026 tactcaaaagagtccgaaggagattgagaaggagaagaagaaggctgagaaactattgaa 4967
Query: 300 atttgctgccaagcaagccaagcaagcacagaaccaagccggacaagccaagaatgcagc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4966 atttgctgccaagcaagccaagcaagcacagaaccaagccggacaagccaagaatgcagc 4907
Query: 360 caagaaggaaaagaagaagaaggaaacggagccaatccctgaatttgtggataagacggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4906 caagaaggaaaagaagaagaaggaaacggagccaatccctgaatttgtggataagacggt 4847
Query: 420 cgcaggtgaaaagaagatcttggtttccttggatgatccagctttgaaggcttacaatcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4846 cgcaggtgaaaagaagatcttggtttccttggatgatccagctttgaaggcttacaatcc 4787
Query: 480 agccaatgtcgaatcctcttggtacgaatggtggaacaaatctggattctttgaaccaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4786 agccaatgtcgaatcctcttggtacgaatggtggaacaaatctggattctttgaaccaga 4727
Query: 540 gttcactaaggacggtaagatcaagccagaaggtgtgttcactattccagctccaccacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4726 gttcactaaggacggtaagatcaagccagaaggtgtgttcactattccagctccaccacc 4667
Query: 600 aaacgttactggttctttacacatcggtcatgctttgactatcgctattcaagattcttt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4666 aaacgttactggttctttacacatcggtcatgctttgactatcgctattcaagattcttt 4607
Query: 660 gtgtagatactaccgtatgaagggtaagacagtgttgttcttaccaggtttcgatcatgc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4606 gtgtagatactaccgtatgaagggtaagacagtgttgttcttaccaggtttcgatcatgc 4547
Query: 720 cggtattgctactcaatccgttgttgagaaacagatttgggcctctgagaaaaagaccag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4546 cggtattgctactcaatccgttgttgagaaacagatttgggcctctgagaaaaagaccag 4487
Query: 780 acacgattacggtagagaagagttcgttgacaaggtctgggaatggraa 828
|||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4486 acacgattacggtagagaagagttcgttgacaaggtctgggaatggaaa 4438
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7326
Number of Sequences: 1807
Number of extensions: 7326
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)